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    F27C1.2 Copper transport protein [ Caenorhabditis elegans ]

    Gene ID: 172196, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F27C1.2
    Official Full Name
    Copper transport protein
    Primary source
    WormBase:WBGene00017852
    Locus tag
    CELE_F27C1.2
    See related
    AllianceGenome:WB:WBGene00017852
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable copper ion transmembrane transporter activity. Predicted to be involved in copper ion transmembrane transport. Predicted to be located in membrane. Orthologous to human SLC31A1 (solute carrier family 31 member 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F27C1.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (5430157..5431450)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit O, mitochondrial Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Cuticle collagen dpy-5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables copper ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in copper ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in copper ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Copper transport protein
    NP_001021418.1
    • Confirmed by transcript evidence
    NP_001021419.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      5430157..5431450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001026248.5 → NP_001021419.1  Copper transport protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021419.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6BEW1
      Conserved Domains (1) summary
      pfam04145
      Location:76 → 234
      Ctr; Ctr copper transporter family

    2. NM_001026247.4 → NP_001021418.1  Copper transport protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021418.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91284
      Conserved Domains (1) summary
      pfam04145
      Location:76 → 230
      Ctr; Ctr copper transporter family
    Nucleotide Protein
    Heading Accession and Version

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