U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    oac-44 Acyl_transf_3 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188333, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    oac-44
    Official Full Name
    Acyl_transf_3 domain-containing protein
    Primary source
    WormBase:WBGene00011654
    Locus tag
    CELE_T09E11.5
    See related
    AllianceGenome:WB:WBGene00011654
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be involved in polysaccharide biosynthetic process. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See oac-44 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (12356942..12359341)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 92 protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Histone deacetylase HDA-4-mediated epigenetic regulation in space-flown C. elegans. Higashitani A, et al. NPJ Microgravity, 2021 Sep 1. PMID 34471121, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in polysaccharide biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Acyl_transf_3 domain-containing protein
    NP_493128.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12356942..12359341
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060727.2 → NP_493128.2  Acyl_transf_3 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493128.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XVG0
      Conserved Domains (2) summary
      COG1835
      Location:6 → 339
      OafA; Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains [Cell wall/membrane/envelope biogenesis]
      pfam19040
      Location:419 → 644
      SGNH; SGNH domain (fused to AT3 domains)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools