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    ZK945.4 putative RING finger protein ZK945.4 [ Caenorhabditis elegans ]

    Gene ID: 174573, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK945.4
    Official Full Name
    putative RING finger protein ZK945.4
    Primary source
    WormBase:WBGene00014166
    Locus tag
    CELE_ZK945.4
    See related
    AllianceGenome:WB:WBGene00014166
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK945.4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (10102971..10105704, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Pumilio domain-containing protein 12 Neighboring gene Ovule protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative RING finger protein ZK945.4
    NP_001379073.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10102971..10105704 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001393176.1 → NP_001379073.1  putative RING finger protein ZK945.4 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09381, Q09623
      Conserved Domains (4) summary
      cd00162
      Location:10 → 56
      RING_Ubox; modified RING-HC finger (C3HC3D-type) [structural motif]
      cd19773
      Location:102 → 151
      Bbox2_TRIM23_C-IX_rpt1; first B-box-type 2 zinc finger found in tripartite motif-containing protein 23 (TRIM23) and similar proteins
      cl00034
      Location:150 → 201
      Bbox_SF; B-box-type zinc finger superfamily
      cl17238
      Location:9 → 57
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q09623.3

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