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    srd-1 Serpentine receptor class delta-1 [ Caenorhabditis elegans ]

    Gene ID: 191794, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srd-1
    Official Full Name
    Serpentine receptor class delta-1
    Primary source
    WormBase:WBGene00005079
    Locus tag
    CELE_F33H1.5
    See related
    AllianceGenome:WB:WBGene00005079
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in amphid neurons; ray structural cell; and in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srd-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    9
    Sequence:
    Chromosome: II; NC_003280.10 (10180199..10182734, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Ww (WW) domain Binding Protein Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA Neighboring gene Serpentine receptor class delta-2 Neighboring gene M-phase inducer phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SRD-1 in AWA neurons is the receptor for female volatile sex pheromones in C. elegans males. Wan X, et al. EMBO Rep, 2019 Mar. PMID 30792215, Free PMC Article
    2. unc-3, a gene required for axonal guidance in Caenorhabditis elegans, encodes a member of the O/E family of transcription factors. Prasad BC, et al. Development, 1998 Apr. PMID 9502737
    3. Sensory experience and sensory activity regulate chemosensory receptor gene expression in Caenorhabditis elegans. Peckol EL, et al. Proc Natl Acad Sci U S A, 2001 Sep 25. PMID 11572964, Free PMC Article
    4. Interplay of neuronal and non-neuronal genes regulates intestinal DAF-16-mediated immune response during Fusarium infection of Caenorhabditis elegans. Nag P, et al. Cell Death Discov, 2017. PMID 29152379, Free PMC Article
    5. Odorant receptor localization to olfactory cilia is mediated by ODR-4, a novel membrane-associated protein. Dwyer ND, et al. Cell, 1998 May 1. PMID 9590179

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class delta-1
    NP_496195.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10180199..10182734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063794.1 → NP_496195.1  Serpentine receptor class delta-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496195.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q19992
      Conserved Domains (1) summary
      pfam10317
      Location:34 → 324
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q19992.1

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