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    K05C4.9 Protein zyg-11 homolog B [ Caenorhabditis elegans ]

    Gene ID: 187021, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K05C4.9
    Official Full Name
    Protein zyg-11 homolog B
    Primary source
    WormBase:WBGene00010585
    Locus tag
    CELE_K05C4.9
    See related
    AllianceGenome:WB:WBGene00010585
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be part of Cul2-RING ubiquitin ligase complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K05C4.9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    8
    Sequence:
    Chromosome: I; NC_003279.8 (14726281..14730738, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene CUB domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Leucine Rich repeat-containing domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Protein zyg-11 homolog B
    NP_001362175.1
    • Confirmed by transcript evidence
    NP_001362176.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      14726281..14730738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001375244.2 → NP_001362175.1  Protein zyg-11 homolog B [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5K1I8Q0
      Conserved Domains (2) summary
      sd00031
      Location:177 → 198
      LRR_1; leucine-rich repeat [structural motif]
      sd00034
      Location:126 → 151
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. NM_001375243.3 → NP_001362176.1  Protein zyg-11 homolog B [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5K1IAT8
      Conserved Domains (2) summary
      COG4886
      Location:61 → 313
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00034
      Location:86 → 111
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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