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    • Showing Current items.

    sre-29 Serpentine receptor class epsilon-29 [ Caenorhabditis elegans ]

    Gene ID: 186477, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sre-29
    Official Full Name
    Serpentine receptor class epsilon-29
    Primary source
    WormBase:WBGene00010220
    Locus tag
    CELE_F57G9.4
    See related
    AllianceGenome:WB:WBGene00010220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in body wall musculature; hypodermis; intestine; and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sre-29 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (12399399..12401891, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class E (Epsilon) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class epsilon-29
    NP_496631.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12399399..12401891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064230.1 → NP_496631.1  Serpentine receptor class epsilon-29 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496631.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O62269
      Conserved Domains (1) summary
      pfam03125
      Location:1 → 356
      Sre; C. elegans Sre G protein-coupled chemoreceptor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O62269.1

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