U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    lmtr-5 Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5 [ Caenorhabditis elegans ]

    Gene ID: 187904, updated on 9-Dec-2024

    Summary

    Official Symbol
    lmtr-5
    Official Full Name
    Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5
    Primary source
    WormBase:WBGene00020101
    Locus tag
    CELE_R148.2
    See related
    AllianceGenome:WB:WBGene00020101
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to contribute to guanyl-nucleotide exchange factor activity. Predicted to be involved in cellular response to amino acid stimulus and positive regulation of TORC1 signaling. Predicted to be located in cytoplasm. Predicted to be part of Ragulator complex. Predicted to be active in lysosome. Orthologous to human LAMTOR5 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 5). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See lmtr-5 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (3183677..3185241)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein Neighboring gene DUF2846 domain-containing protein;DUF4476 domain-containing protein Neighboring gene MecKel-Gruber Syndrome (MKS) homolog Neighboring gene tRNA Neighboring gene tRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    contributes_to guanyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to amino acid stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of TORC1 signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of Ragulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Ragulator complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5
    NP_497668.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3183677..3185241
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065267.4NP_497668.2  Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497668.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17268
      Conserved Domains (1) summary
      pfam16672
      Location:192
      LAMTOR5; Ragulator complex protein LAMTOR5