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    str-118 Seven TM Receptor [ Caenorhabditis elegans ]

    Gene ID: 186429, updated on 9-Dec-2024

    Summary

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    Official Symbol
    str-118
    Official Full Name
    Seven TM Receptor
    Primary source
    WormBase:WBGene00006169
    Locus tag
    CELE_F57A8.3
    See related
    AllianceGenome:WB:WBGene00006169
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See str-118 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (10052155..10053873)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Protein TSSC4 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Protein YIF1 Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene Nuclear receptor domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in olfactory behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Seven TM Receptor
    NP_001256178.1
    • Partially confirmed by transcript evidence
    NP_001343567.1
    • Partially confirmed by transcript evidence
    NP_001343849.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10052155..10053873
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356734.1 → NP_001343567.1  Seven TM Receptor [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20914
      Conserved Domains (1) summary
      cl22924
      Location:10 → 323
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    2. NM_001356735.1 → NP_001343849.1  Seven TM Receptor [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2C9C3P4
      Conserved Domains (1) summary
      cl22924
      Location:10 → 278
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd

    3. NM_001269249.3 → NP_001256178.1  Seven TM Receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256178.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E3W736
      Conserved Domains (1) summary
      cl22924
      Location:10 → 218
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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