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    swt-4 Sugar transporter SWEET [ Caenorhabditis elegans ]

    Gene ID: 189708, updated on 9-Dec-2024

    Summary

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    Official Symbol
    swt-4
    Official Full Name
    Sugar transporter SWEET
    Primary source
    WormBase:WBGene00012647
    Locus tag
    CELE_Y39A1A.8
    See related
    AllianceGenome:WB:WBGene00012647
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport. Predicted to be located in Golgi membrane and plasma membrane. Predicted to be active in membrane. Orthologous to human SLC50A1 (solute carrier family 50 member 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See swt-4 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (10625932..10629143, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene eLRR (extracellular Leucine-Rich Repeat) ONly Neighboring gene Cell cycle checkpoint control protein;Cell cycle checkpoint protein hpr-9 Neighboring gene ncRNA Neighboring gene tRNA-Thr Neighboring gene Gamma-tubulin complex component Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables sugar transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in carbohydrate transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in carbohydrate transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Sugar transporter SWEET
    NP_001366656.1
    • Confirmed by transcript evidence
    NP_001368659.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      10625932..10629143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001379909.1 → NP_001366656.1  Sugar transporter SWEET [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XX26
      Conserved Domains (2) summary
      pfam03083
      Location:11 → 97
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:130 → 215
      PQ-loop; PQ loop repeat

    2. NM_001379908.1 → NP_001368659.1  Sugar transporter SWEET [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1X7RBT7
      Conserved Domains (2) summary
      pfam03083
      Location:29 → 115
      MtN3_slv; Sugar efflux transporter for intercellular exchange
      cl21610
      Location:148 → 233
      PQ-loop; PQ loop repeat
    Nucleotide Protein
    Heading Accession and Version

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