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    B0205.8 TFG domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172976, updated on 9-Dec-2024

    Summary

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    Official Symbol
    B0205.8
    Official Full Name
    TFG domain-containing protein
    Primary source
    WormBase:WBGene00015022
    Locus tag
    CELE_B0205.8
    See related
    AllianceGenome:WB:WBGene00015022
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in RNA 5'-cap (guanine-N7)-methylation. Predicted to be part of mRNA capping enzyme complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See B0205.8 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (10728898..10730233, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class Z Neighboring gene CX domain-containing protein Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 Neighboring gene YtxH domain-containing protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 4 Neighboring gene Large ribosomal subunit protein bL9m

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in RNA 5'-cap (guanine-N7)-methylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mRNA capping enzyme complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    TFG domain-containing protein
    NP_492808.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10728898..10730233 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060407.6 → NP_492808.1  TFG domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492808.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61743
      Conserved Domains (1) summary
      pfam15320
      Location:6 → 89
      RAM; mRNA cap methylation, RNMT-activating mini protein
    Nucleotide Protein
    Heading Accession and Version

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