U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    zipt-16 Zrt (ZRT), Irt- (IRT-) like Protein Transporter [ Caenorhabditis elegans ]

    Gene ID: 179576, updated on 9-Dec-2024

    Summary

    Official Symbol
    zipt-16
    Official Full Name
    Zrt (ZRT), Irt- (IRT-) like Protein Transporter
    Primary source
    WormBase:WBGene00006486
    Locus tag
    CELE_T11F9.2
    See related
    AllianceGenome:WB:WBGene00006486
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable monoatomic cation:bicarbonate symporter activity and zinc ion transmembrane transporter activity. Predicted to be involved in intracellular monoatomic cation homeostasis and zinc ion import across plasma membrane. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in nervous system and tail. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIn. Orthologous to human SLC39A8 (solute carrier family 39 member 8). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See zipt-16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (11463013..11466770)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Amino acid transporter protein 6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Zinc metalloproteinase nas-20

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables monoatomic cation:bicarbonate symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intracellular monoatomic cation homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in metal ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in zinc ion import across plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Zrt (ZRT), Irt- (IRT-) like Protein Transporter
    NP_001369943.1
    • Product from WormBase gene class zipt;
      Confirmed by transcript evidence
    NP_001370142.1
    • Product from WormBase gene class zipt;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      11463013..11466770
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383406.2NP_001370142.1  Zrt (ZRT), Irt- (IRT-) like Protein Transporter [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I4G0
      Conserved Domains (1) summary
      cl00437
      Location:293497
      Zip; ZIP Zinc transporter
    2. NM_001383407.2NP_001369943.1  Zrt (ZRT), Irt- (IRT-) like Protein Transporter [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22395
      Conserved Domains (1) summary
      cl00437
      Location:300504
      Zip; ZIP Zinc transporter