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    tag-10 DPPIV_N domain-containing protein;Protein TolB;Translocation protein TolB [ Caenorhabditis elegans ]

    Gene ID: 175011, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tag-10
    Official Full Name
    DPPIV_N domain-containing protein;Protein TolB;Translocation protein TolB
    Primary source
    WormBase:WBGene00006404
    Locus tag
    CELE_C31C9.1
    See related
    AllianceGenome:WB:WBGene00006404
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable serine-type peptidase activity. Located in membrane raft. Is expressed in amphid neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See tag-10 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (13632584..13636998)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Glutathione S-Transferase Neighboring gene GST C-terminal domain-containing protein Neighboring gene Glutathione S-transferase Neighboring gene D-3-phosphoglycerate dehydrogenase Neighboring gene F-box domain-containing protein Neighboring gene pseudo Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An analysis of the Caenorhabditis elegans lipid raft proteome using geLC-MS/MS. Rao W, et al. J Proteomics, 2011 Feb 1. PMID 21070894
    2. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
    3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables serine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane raft HDA PubMed 

    General protein information

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    Preferred Names
    DPPIV_N domain-containing protein;Protein TolB;Translocation protein TolB
    NP_001309535.1
    • Confirmed by transcript evidence
    NP_001309536.1
    • Confirmed by transcript evidence
    NP_496867.2
    • Confirmed by transcript evidence
    NP_871957.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      13632584..13636998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001322756.4 → NP_001309535.1  Translocation protein TolB [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCY4, B8ZX16
      Conserved Domains (1) summary
      pfam07676
      Location:208 → 244
      PD40; WD40-like Beta Propeller Repeat

    2. NM_064466.6 → NP_496867.2  Protein TolB [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496867.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B8ZX16, G5EG67
      Conserved Domains (1) summary
      pfam07676
      Location:208 → 244
      PD40; WD40-like Beta Propeller Repeat

    3. NM_001322757.3 → NP_001309536.1  DPPIV_N domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MBC3, B8ZX16
      Conserved Domains (1) summary
      pfam07676
      Location:208 → 244
      PD40; WD40-like Beta Propeller Repeat

    4. NM_182157.5 → NP_871957.1  DPPIV_N domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_871957.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B8ZX16, G5EER7
      Conserved Domains (1) summary
      pfam07676
      Location:208 → 244
      PD40; WD40-like Beta Propeller Repeat
    Nucleotide Protein
    Heading Accession and Version

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