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    T05F1.2 F-box associated domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172804, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T05F1.2
    Official Full Name
    F-box associated domain-containing protein
    Primary source
    WormBase:WBGene00011489
    Locus tag
    CELE_T05F1.2
    See related
    AllianceGenome:WB:WBGene00011489
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in germ line. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T05F1.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (9622613..9624724)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene putative histone-binding protein lin-53 Neighboring gene Nicalin Neighboring gene Small ribosomal subunit protein eS19 Neighboring gene Protein hsr-9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    2. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box associated domain-containing protein
    NP_492554.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9622613..9624724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060153.5 → NP_492554.1  F-box associated domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492554.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XUR4
    Nucleotide Protein
    Heading Accession and Version

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