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    F01D5.8 Serine aminopeptidase S33 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175052, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F01D5.8
    Official Full Name
    Serine aminopeptidase S33 domain-containing protein
    Primary source
    WormBase:WBGene00008498
    Locus tag
    CELE_F01D5.8
    See related
    AllianceGenome:WB:WBGene00008498
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable palmitoyl-(protein) hydrolase activity. Predicted to be involved in macromolecule depalmitoylation. Predicted to be active in endosome membrane and plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F01D5.8 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (14010706..14013846)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TPM domain-containing protein Neighboring gene ncRNA Neighboring gene Serine aminopeptidase S33 domain-containing protein Neighboring gene CYtochrome P450 family Neighboring gene Carbohydrate sulfotransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables palmitoyl-(protein) hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in macromolecule depalmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Serine aminopeptidase S33 domain-containing protein
    NP_496938.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14010706..14013846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064537.8 → NP_496938.2  Serine aminopeptidase S33 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496938.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XVA7
      Conserved Domains (2) summary
      COG0596
      Location:162 → 334
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam00561
      Location:168 → 243
      Abhydrolase_1; alpha/beta hydrolase fold

    RNA

    1. NR_131426.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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