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    Y2H9A.4 Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 189352, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y2H9A.4
    Official Full Name
    Transmembrane protein
    Primary source
    WormBase:WBGene00012381
    Locus tag
    CELE_Y2H9A.4
    See related
    AllianceGenome:WB:WBGene00012381
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y2H9A.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    12
    Sequence:
    Chromosome: V; NC_003283.11 (13445899..13448815)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Transmembrane protein Neighboring gene pseudo Neighboring gene UPAR/Ly6 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein
    NP_001256504.1
    • Confirmed by transcript evidence
    NP_001256505.1
    • Confirmed by transcript evidence
    NP_001256506.1
    • Confirmed by transcript evidence
    NP_001300000.1
    • Partially confirmed by transcript evidence
    NP_001300001.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13445899..13448815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269575.3 → NP_001256504.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256504.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H8ESD3
      Conserved Domains (2) summary
      pfam05218
      Location:432 → 611
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:280 → 433
      AAA_23; AAA domain

    2. NM_001269576.1 → NP_001256505.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256505.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EFR4
      Conserved Domains (2) summary
      pfam05218
      Location:407 → 586
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:255 → 408
      AAA_23; AAA domain

    3. NM_001269577.1 → NP_001256506.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256506.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H8ESD2
      Conserved Domains (2) summary
      pfam05218
      Location:404 → 583
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:252 → 405
      AAA_23; AAA domain

    4. NM_001313072.1 → NP_001300001.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUJ3
      Conserved Domains (2) summary
      pfam05218
      Location:407 → 586
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:255 → 408
      AAA_23; AAA domain

    5. NM_001313071.1 → NP_001300000.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AS51
      Conserved Domains (2) summary
      pfam05218
      Location:404 → 583
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:252 → 405
      AAA_23; AAA domain
    Nucleotide Protein
    Heading Accession and Version

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