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    K10H10.4 AT rich interactive domain 1B (SWI1-like);Secreted protein [ Caenorhabditis elegans ]

    Gene ID: 175109, updated on 18-Sep-2024

    Summary

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    Official Symbol
    K10H10.4
    Official Full Name
    AT rich interactive domain 1B (SWI1-like);Secreted protein
    Primary source
    WormBase:WBGene00010760
    Locus tag
    CELE_K10H10.4
    See related
    AllianceGenome:WB:WBGene00010760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See K10H10.4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (14500422..14501663)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SDR family NAD(P)-dependent oxidoreductase Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene DeHydrogenases, Short chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Shifted Transversal Design smart-pooling for high coverage interactome mapping. Xin X, et al. Genome Res, 2009 Jul. PMID 19447967, Free PMC Article
    2. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AT rich interactive domain 1B (SWI1-like);Secreted protein
    NP_001293545.1
    • Confirmed by transcript evidence
    NP_497010.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14500422..14501663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064609.6 → NP_497010.2  Secreted protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497010.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45681

    2. NM_001306616.3 → NP_001293545.1  AT rich interactive domain 1B (SWI1-like) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293545.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PR07
    Nucleotide Protein
    Heading Accession and Version

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