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    ZK973.1 S1 motif domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172040, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK973.1
    Official Full Name
    S1 motif domain-containing protein
    Primary source
    WormBase:WBGene00022830
    Locus tag
    CELE_ZK973.1
    See related
    AllianceGenome:WB:WBGene00022830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Orthologous to human SRBD1 (S1 RNA binding domain 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK973.1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (4382565..4385218)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Chromo domain-containing protein Neighboring gene Thioredoxin domain-containing protein Neighboring gene Dynein heavy chain, cytoplasmic;Dynein heavy chain, cytosolic Neighboring gene Peptidase S1 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleobase-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    S1 motif domain-containing protein
    NP_491362.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4382565..4385218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058961.4 → NP_491362.1  S1 motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491362.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N4L5
      Conserved Domains (1) summary
      COG2183
      Location:27 → 742
      Tex; Transcriptional accessory protein Tex/SPT6 [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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