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    fbxa-216 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190001, updated on 18-Sep-2024

    Summary

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    Official Symbol
    fbxa-216
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00012953
    Locus tag
    CELE_Y47H9C.10
    See related
    AllianceGenome:WB:WBGene00012953
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See fbxa-216 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (11901660..11903310)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Mos1 transposase HTH domain-containing protein Neighboring gene pseudo Neighboring gene Zinc finger PHD-type domain-containing protein Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_001364570.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11901660..11903310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001377646.1 → NP_001364570.1  F-box domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWD4
      Conserved Domains (3) summary
      smart00256
      Location:131 → 170
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:242 → 406
      FTH; FTH domain
      pfam17906
      Location:76 → 112
      HTH_48; HTH domain in Mos1 transposase
    Nucleotide Protein
    Heading Accession and Version

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