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    • Showing Current items.

    Y75B8A.19 RING-type E3 ubiquitin transferase [ Caenorhabditis elegans ]

    Gene ID: 190706, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y75B8A.19
    Official Full Name
    RING-type E3 ubiquitin transferase
    Primary source
    WormBase:WBGene00013554
    Locus tag
    CELE_Y75B8A.19
    See related
    AllianceGenome:WB:WBGene00013554
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transferase activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y75B8A.19 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (12226632..12232658)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Golgi pH regulator Neighboring gene Geminin homolog Neighboring gene Clathrin light chain Neighboring gene ncRNA Neighboring gene Ground-like domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene Protein timeless homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING-type E3 ubiquitin transferase
    NP_499591.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12226632..12232658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067190.5 → NP_499591.1  RING-type E3 ubiquitin transferase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499591.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XW67
    Nucleotide Protein
    Heading Accession and Version

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