U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    tni-1 Troponin I 1 [ Caenorhabditis elegans ]

    Gene ID: 181329, updated on 9-Dec-2024

    Summary

    Official Symbol
    tni-1
    Official Full Name
    Troponin I 1
    Primary source
    WormBase:WBGene00006584
    Locus tag
    CELE_F42E11.4
    See related
    AllianceGenome:WB:WBGene00006584
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables troponin C binding activity. Involved in backward locomotion. Part of muscle thin filament tropomyosin. Is expressed in several structures, including body wall musculature; gonad; non-striated muscle; rectal muscle; and in male. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; distal arthrogryposis type 2B1; and intrinsic cardiomyopathy (multiple). Orthologous to human TNNI1 (troponin I1, slow skeletal type); TNNI2 (troponin I2, fast skeletal type); and TNNI3 (troponin I3, cardiac type). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See tni-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (11375887..11377470, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Protein tweety homolog 1 Neighboring gene Brp/Blh family beta-carotene 15,15'-monooxygenase Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables troponin C binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in backward locomotion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in muscle contraction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of muscle thin filament tropomyosin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of troponin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Troponin I 1
    NP_509906.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11375887..11377470 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077505.8NP_509906.1  Troponin I 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509906.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q20334, Q5FBV5
      Conserved Domains (1) summary
      pfam00992
      Location:58191
      Troponin; Troponin