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    ram-5 ZP domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181550, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ram-5
    Official Full Name
    ZP domain-containing protein
    Primary source
    WormBase:WBGene00004301
    Locus tag
    CELE_T24C2.1
    See related
    AllianceGenome:WB:WBGene00004301
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in nematode male tail tip morphogenesis. Located in plasma membrane. Is expressed in ray structural cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ram-5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    17
    Sequence:
    Chromosome: X; NC_003284.9 (14550149..14556191)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of ram-5 in the structural cell is required for sensory ray morphogenesis in Caenorhabditis elegans male tail. Yu RY, et al. EMBO J, 2000 Jul 17. PMID 10899109, Free PMC Article
    2. Mutations with sensory ray defect unmask cuticular glycoprotein antigens in Caenorhabditis elegans male tail. Ko FC, et al. Dev Growth Differ, 2000 Feb. PMID 10831045
    3. The glia of Caenorhabditis elegans. Oikonomou G, et al. Glia, 2011 Sep. PMID 21732423, Free PMC Article
    4. Stress-induced phenocopy of C. elegans defines functional steps of sensory organ differentiation. Chow KL, et al. Dev Growth Differ, 1999 Oct. PMID 10545035
    5. Genome-wide analysis of sex-enriched gene expression during C. elegans larval development. Thoemke K, et al. Dev Biol, 2005 Aug 15. PMID 15987632

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in nematode male tail tip morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ZP domain-containing protein
    NP_510422.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      14550149..14556191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078021.5 → NP_510422.2  ZP domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510422.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EC82
      Conserved Domains (2) summary
      PRK13042
      Location:522 → 590
      PRK13042; superantigen-like protein SSL4; Reviewed
      cl27758
      Location:36 → 264
      Zona_pellucida; Zona pellucida-like domain
    Nucleotide Protein
    Heading Accession and Version

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