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    pigu-1 GPI transamidase component GAB1 [ Caenorhabditis elegans ]

    Gene ID: 172565, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pigu-1
    Official Full Name
    GPI transamidase component GAB1
    Primary source
    WormBase:WBGene00011914
    Locus tag
    CELE_T22C1.3
    See related
    AllianceGenome:WB:WBGene00011914
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in attachment of GPI anchor to protein. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of GPI-anchor transamidase complex. Orthologous to human PIGU (phosphatidylinositol glycan anchor biosynthesis class U). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pigu-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (7938560..7940144)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Myosin-11 Neighboring gene UBR-type domain-containing protein Neighboring gene Globin-like protein 26 Neighboring gene Ctf8 Neighboring gene TFIIIC_sub6 domain-containing protein Neighboring gene Transport and Golgi organization protein 1 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in attachment of GPI anchor to protein IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in attachment of GPI anchor to protein IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of GPI-anchor transamidase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of GPI-anchor transamidase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    GPI transamidase component GAB1
    NP_492189.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7938560..7940144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059788.6 → NP_492189.2  GPI transamidase component GAB1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492189.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22672
      Conserved Domains (1) summary
      pfam06728
      Location:32 → 382
      PIG-U; GPI transamidase subunit PIG-U
    Nucleotide Protein
    Heading Accession and Version

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