U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    F07E5.5 CCHC-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173564, updated on 2-Nov-2024

    Summary

    Official Symbol
    F07E5.5
    Official Full Name
    CCHC-type domain-containing protein
    Primary source
    WormBase:WBGene00017210
    Locus tag
    CELE_F07E5.5
    See related
    AllianceGenome:WB:WBGene00017210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable enzyme binding activity; nucleic acid binding activity; and zinc ion binding activity. Predicted to be located in cytoplasm. Predicted to be active in nucleolus. Orthologous to human ZCCHC9 (zinc finger CCHC-type containing 9). [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See F07E5.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (2053919..2059070, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene F-box domain-containing protein Neighboring gene pseudo Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables enzyme binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    CCHC-type domain-containing protein
    NP_494168.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2053919..2059070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061767.5NP_494168.1  CCHC-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494168.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91223
      Conserved Domains (1) summary
      PTZ00368
      Location:228324
      PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional