U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y2H9A.4 Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 189352, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y2H9A.4
    Official Full Name
    Transmembrane protein
    Primary source
    WormBase:WBGene00012381
    Locus tag
    CELE_Y2H9A.4
    See related
    AllianceGenome:WB:WBGene00012381
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y2H9A.4 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    12
    Sequence:
    Chromosome: V; NC_003283.11 (13445899..13448815)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Transmembrane protein Neighboring gene pseudo Neighboring gene UPAR/Ly6 domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Transmembrane protein
    NP_001256504.1
    • Confirmed by transcript evidence
    NP_001256505.1
    • Confirmed by transcript evidence
    NP_001256506.1
    • Confirmed by transcript evidence
    NP_001300000.1
    • Partially confirmed by transcript evidence
    NP_001300001.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13445899..13448815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269575.3 → NP_001256504.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256504.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H8ESD3
      Conserved Domains (2) summary
      pfam05218
      Location:432 → 611
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:280 → 433
      AAA_23; AAA domain

    2. NM_001269576.1 → NP_001256505.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256505.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EFR4
      Conserved Domains (2) summary
      pfam05218
      Location:407 → 586
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:255 → 408
      AAA_23; AAA domain

    3. NM_001269577.1 → NP_001256506.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256506.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H8ESD2
      Conserved Domains (2) summary
      pfam05218
      Location:404 → 583
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:252 → 405
      AAA_23; AAA domain

    4. NM_001313072.1 → NP_001300001.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUJ3
      Conserved Domains (2) summary
      pfam05218
      Location:407 → 586
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:255 → 408
      AAA_23; AAA domain

    5. NM_001313071.1 → NP_001300000.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AS51
      Conserved Domains (2) summary
      pfam05218
      Location:404 → 583
      DUF713; Protein of unknown function (DUF713)
      pfam13476
      Location:252 → 405
      AAA_23; AAA domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools