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    vps-60 Charged multivesicular body protein 5 [ Caenorhabditis elegans ]

    Gene ID: 179242, updated on 9-Dec-2024

    Summary

    Official Symbol
    vps-60
    Official Full Name
    Charged multivesicular body protein 5
    Primary source
    WormBase:WBGene00018290
    Locus tag
    CELE_F41E6.9
    See related
    AllianceGenome:WB:WBGene00018290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and vesicle budding from membrane. Predicted to be active in multivesicular body. Orthologous to human CHMP5 (charged multivesicular body protein 5). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See vps-60 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (8605088..8606128, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Sushi domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene FMN hydroxy acid dehydrogenase domain-containing protein Neighboring gene Serine/threonine-protein phosphatase 4 regulatory subunit 3-like central domain-containing protein Neighboring gene Fungus-Induced Protein Neighboring gene ncRNA

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in multivesicular body  

    General protein information

    Preferred Names
    Charged multivesicular body protein 5
    NP_505219.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      8605088..8606128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072818.6NP_505219.1  Charged multivesicular body protein 5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505219.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16458
      Conserved Domains (1) summary
      cl21588
      Location:1191
      Snf7; Snf7
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