U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y48C3A.5 Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 174973, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y48C3A.5
    Official Full Name
    Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein
    Primary source
    WormBase:WBGene00012989
    Locus tag
    CELE_Y48C3A.5
    See related
    AllianceGenome:WB:WBGene00012989
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y48C3A.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    13
    Sequence:
    Chromosome: II; NC_003280.10 (13271076..13304224)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Failed axon connections homolog Neighboring gene Protein mac-1 Neighboring gene Single-stranded DNA-binding protein homolog sam-10

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Serine-rich adhesin for platelets;Uncharacterized protein;uncharacterized protein
    NP_001364557.1
    • Confirmed by transcript evidence
    NP_001379439.1
    • Confirmed by transcript evidence; Similar to
    NP_496810.3
    • Partially confirmed by transcript evidence
    NP_872045.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      13271076..13304224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001377889.2 → NP_001364557.1  Serine-rich adhesin for platelets [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9MN21

    2. NM_064409.7 → NP_496810.3  Serine-rich adhesin for platelets [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496810.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I0Z6

    3. NM_182245.4 → NP_872045.2  Uncharacterized protein CELE_Y48C3A.5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_872045.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I0Z5

    4. NM_001393220.1 → NP_001379439.1  uncharacterized protein CELE_Y48C3A.5 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q599F7
      Conserved Domains (1) summary
      PTZ00449
      Location:16 → 143
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools