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    hrde-4 Protein hrde-4 [ Caenorhabditis elegans ]

    Gene ID: 188371, updated on 2-Nov-2024

    Summary

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    Official Symbol
    hrde-4
    Official Full Name
    Protein hrde-4
    Primary source
    WormBase:WBGene00020403
    Locus tag
    CELE_T10B11.7
    See related
    AllianceGenome:WB:WBGene00020403
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulatory ncRNA-mediated gene silencing. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See hrde-4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    11
    Sequence:
    Chromosome: I; NC_003279.8 (6945598..6950499, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF1273 family protein Neighboring gene Transmembrane protein 53 Neighboring gene Putative pterin-4-alpha-carbinolamine dehydratase Neighboring gene BACK domain-containing protein Neighboring gene Endoribonuclease rege-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The RNAi Inheritance Machinery of Caenorhabditis elegans. Spracklin G, et al. Genetics, 2017 Jul. PMID 28533440, Free PMC Article
    2. A protein domain-based interactome network for C. elegans early embryogenesis. Boxem M, et al. Cell, 2008 Aug 8. PMID 18692475, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulatory ncRNA-mediated gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Protein hrde-4
    NP_001040682.2
    • Confirmed by transcript evidence
    NP_001367601.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6945598..6950499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047217.5 → NP_001040682.2  Protein hrde-4 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040682.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C6S3L8, H2KZ49

    2. NM_001380623.1 → NP_001367601.1  Protein hrde-4 [Caenorhabditis elegans]

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    H2KZ49.1

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