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    iglr-1 Ig-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184720, updated on 9-Dec-2024

    Summary

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    Official Symbol
    iglr-1
    Official Full Name
    Ig-like domain-containing protein
    Primary source
    WormBase:WBGene00008977
    Locus tag
    CELE_F20D1.7
    See related
    AllianceGenome:WB:WBGene00008977
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in head neurons and ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See iglr-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    11
    Sequence:
    Chromosome: X; NC_003284.9 (14987365..14991380, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene DUF3467 domain-containing protein Neighboring gene Rab3 GTPase-activating protein catalytic subunit Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity. Sutphin GL, et al. Aging Cell, 2017 Aug. PMID 28401650, Free PMC Article
    2. Healthspan pathway maps in C. elegans and humans highlight transcription, proliferation/biosynthesis and lipids. Möller S, et al. Aging (Albany NY), 2020 Jul 7. PMID 32634117, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ig-like domain-containing protein
    NP_510491.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      14987365..14991380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078090.8 → NP_510491.2  Ig-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510491.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93539
      Conserved Domains (2) summary
      COG4886
      Location:104 → 325
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:106 → 128
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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