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    clec-143 VWFA domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 191390, updated on 28-Oct-2024

    Summary

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    Official Symbol
    clec-143
    Official Full Name
    VWFA domain-containing protein
    Primary source
    WormBase:WBGene00014063
    Locus tag
    CELE_ZK673.9
    See related
    AllianceGenome:WB:WBGene00014063
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See clec-143 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    9
    Sequence:
    Chromosome: II; NC_003280.10 (10468202..10470297, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene SKN-1 Dependent Zygotic transcript Neighboring gene Troponin C Neighboring gene Pepsin-I3 domain-containing protein Neighboring gene Spore coat protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specificity of the innate immune system and diversity of C-type lectin domain (CTLD) proteins in the nematode Caenorhabditis elegans. Schulenburg H, et al. Immunobiology, 2008. PMID 18406370
    2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    VWFA domain-containing protein
    NP_496252.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10468202..10470297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063851.3 → NP_496252.1  VWFA domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496252.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EE24
      Conserved Domains (2) summary
      smart00034
      Location:238 → 385
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      cd01477
      Location:23 → 216
      vWA_F09G8-8_type; VWA F09G8.8 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b ...
    Nucleotide Protein
    Heading Accession and Version

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