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    • Showing Current items.

    C16C10.8 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 175531, updated on 2-Nov-2024

    Summary

    Official Symbol
    C16C10.8
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00007628
    Locus tag
    CELE_C16C10.8
    See related
    AllianceGenome:WB:WBGene00007628
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and rRNA processing. Predicted to be located in nucleus. Predicted to be active in nucleolus. Orthologous to human LYAR (Ly1 antibody reactive). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See C16C10.8 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (4161970..4164171, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene RAP domain-containing protein Neighboring gene E3 ubiquitin ligase rnf-5;RING finger protein 5;RING-type E3 ubiquitin transferase Neighboring gene Nuclear speckle splicing regulatory protein 1 homolog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in rRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Uncharacterized protein
    NP_497829.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4161970..4164171 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065428.8NP_497829.1  Uncharacterized protein CELE_C16C10.8 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497829.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09464
      Conserved Domains (1) summary
      pfam08790
      Location:3057
      zf-LYAR; LYAR-type C2HC zinc finger