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    zhit-2 HIT-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185691, updated on 9-Dec-2024

    Summary

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    Official Symbol
    zhit-2
    Official Full Name
    HIT-type domain-containing protein
    Primary source
    WormBase:WBGene00009648
    Locus tag
    CELE_F43C1.3
    See related
    AllianceGenome:WB:WBGene00009648
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human ZNHIT2 (zinc finger HIT-type containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See zhit-2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (4243674..4244385, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Coiled-coil domain-containing protein 25 Neighboring gene Large ribosomal subunit protein bL21m Neighboring gene WD repeat-containing protein 55 Neighboring gene DEP domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    HIT-type domain-containing protein
    NP_497850.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4243674..4244385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065449.8 → NP_497850.2  HIT-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497850.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K7S3
      Conserved Domains (1) summary
      pfam04438
      Location:9 → 36
      zf-HIT; HIT zinc finger
    Nucleotide Protein
    Heading Accession and Version

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