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    tres-1 Treslin STD domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172287, updated on 2-Nov-2024

    Summary

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    Official Symbol
    tres-1
    Official Full Name
    Treslin STD domain-containing protein
    Primary source
    WormBase:WBGene00022750
    Locus tag
    CELE_ZK484.4
    See related
    AllianceGenome:WB:WBGene00022750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including AB; ABa; EMS; Psub1; and Psub2. Orthologous to human TICRR (TOPBP1 interacting checkpoint and replication regulator). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See tres-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    15
    Sequence:
    Chromosome: I; NC_003279.8 (6070232..6078896, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene GPI ethanolamine phosphate transferase 3 Neighboring gene Methyl-CpG binding protein 2/3 C-terminal domain-containing protein Neighboring gene Histone H1 Neighboring gene ncRNA Neighboring gene ABC-type antigen peptide transporter Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DNSN-1 recruits GINS for CMG helicase assembly during DNA replication initiation in Caenorhabditis elegans. Xia Y, et al. Science, 2023 Sep 22. PMID 37590372, Free PMC Article
    2. Dose-dependent functions of SWI/SNF BAF in permitting and inhibiting cell proliferation in vivo. van der Vaart A, et al. Sci Adv, 2020 May. PMID 32494730, Free PMC Article
    3. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    4. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Treslin STD domain-containing protein
    NP_491753.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6070232..6078896 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059352.4 → NP_491753.1  Treslin STD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491753.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ16
      Conserved Domains (1) summary
      pfam15292
      Location:224 → 432
      Treslin_N; Treslin N-terminus
    Nucleotide Protein
    Heading Accession and Version

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