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    dur-1 Dauer Up-Regulated [ Caenorhabditis elegans ]

    Gene ID: 177846, updated on 18-Sep-2024

    Summary

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    Official Symbol
    dur-1
    Official Full Name
    Dauer Up-Regulated
    Primary source
    WormBase:WBGene00001113
    Locus tag
    CELE_F25H8.5
    See related
    AllianceGenome:WB:WBGene00001113
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See dur-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    25
    Sequence:
    Chromosome: IV; NC_003282.8 (9921938..9928230, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Zinc finger BED domain-containing protein 3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA methyltransferase 10 homolog A Neighboring gene H/ACA ribonucleoprotein complex non-core subunit NAF1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diverse Caenorhabditis elegans genes that are upregulated in dauer larvae also show elevated transcript levels in long-lived, aged, or starved adults. Cherkasova V, et al. J Mol Biol, 2000 Jul 14. PMID 10884342
    2. Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation. Erkut C, et al. PLoS One, 2013. PMID 24324795, Free PMC Article
    3. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
    4. Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis. Crawford ED, et al. Cell Death Differ, 2012 Dec. PMID 22918439, Free PMC Article
    5. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Dauer Up-Regulated
    NP_001023145.1
    • Confirmed by transcript evidence
    NP_001255433.1
    • Partially confirmed by transcript evidence
    NP_001255434.1
    • Partially confirmed by transcript evidence
    NP_001255435.1
    • Partially confirmed by transcript evidence
    NP_001255436.1
    • Partially confirmed by transcript evidence
    NP_001255438.1
    • Confirmed by transcript evidence
    NP_001255439.1
    • Confirmed by transcript evidence
    NP_001255440.1
    • Confirmed by transcript evidence
    NP_001255443.1
    • Confirmed by transcript evidence
    NP_001255446.1
    • Partially confirmed by transcript evidence
    NP_001293942.1
    • Partially confirmed by transcript evidence
    NP_001360167.1
    • Confirmed by transcript evidence
    NP_001368122.1
    • Confirmed by transcript evidence
    NP_001370882.1
    • Confirmed by transcript evidence
    NP_001370883.1
    • Confirmed by transcript evidence
    NP_001380114.1
    • Confirmed by transcript evidence
    NP_501786.2
    • Partially confirmed by transcript evidence
    NP_501787.3
    • Partially confirmed by transcript evidence
    NP_501788.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9921938..9928230 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383173.1 → NP_001370882.1  Dauer Up-Regulated [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U1

    2. NM_001372910.1 → NP_001360167.1  Dauer Up-Regulated [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U5

    3. NM_001027974.4 → NP_001023145.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001023145.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JLY3
      Conserved Domains (1) summary
      TIGR00927
      Location:27 → 259
      2A1904; K+-dependent Na+/Ca+ exchanger

    4. NM_069385.6 → NP_501786.2  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501786.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19790
      Conserved Domains (2) summary
      cl01503
      Location:494 → 640
      TrbL; TrbL/VirB6 plasmid conjugal transfer protein
      cl21509
      Location:301 → 416
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    5. NM_001268504.3 → NP_001255433.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255433.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2T7
      Conserved Domains (1) summary
      cl21509
      Location:40 → 156
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    6. NM_001268505.3 → NP_001255434.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255434.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2T6
      Conserved Domains (1) summary
      cl21509
      Location:63 → 178
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    7. NM_069386.8 → NP_501787.3  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501787.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95ZV0
      Conserved Domains (2) summary
      cl01503
      Location:512 → 658
      TrbL; TrbL/VirB6 plasmid conjugal transfer protein
      cl21509
      Location:295 → 436
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    8. NM_001268506.3 → NP_001255435.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255435.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U6
      Conserved Domains (1) summary
      cl21509
      Location:47 → 179
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    9. NM_001268507.3 → NP_001255436.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255436.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U2
      Conserved Domains (3) summary
      COG0840
      Location:321 → 596
      Tar; Methyl-accepting chemotaxis protein [Cell motility, Signal transduction mechanisms]
      cl01503
      Location:535 → 681
      TrbL; TrbL/VirB6 plasmid conjugal transfer protein
      cl21509
      Location:318 → 459
      ApoLp-III_like; Apolipophorin-III and similar insect proteins

    10. NM_001307013.3 → NP_001293942.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293942.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A061ACN9

    11. NM_001268509.3 → NP_001255438.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255438.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2T9

    12. NM_001268510.3 → NP_001255439.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255439.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3YT33

    13. NM_001268511.3 → NP_001255440.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255440.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U3

    14. NM_001392376.1 → NP_001380114.1  Dauer Up-Regulated [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2T8

    15. NM_001268514.3 → NP_001255443.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255443.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3YT34

    16. NM_001383175.1 → NP_001370883.1  Dauer Up-Regulated [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U7

    17. NM_001380423.1 → NP_001368122.1  Dauer Up-Regulated [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U0

    18. NM_069387.5 → NP_501788.2  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501788.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JLY2

    19. NM_001268517.5 → NP_001255446.1  Dauer Up-Regulated [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255446.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2U4
    Nucleotide Protein
    Heading Accession and Version

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