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    taf-11.1 TAFII28-like protein domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 180698, updated on 9-Dec-2024

    Summary

    Official Symbol
    taf-11.1
    Official Full Name
    TAFII28-like protein domain-containing protein
    Primary source
    WormBase:WBGene00006393
    Locus tag
    CELE_F48D6.1
    See related
    AllianceGenome:WB:WBGene00006393
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable protein heterodimerization activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Orthologous to several human genes including TAF11 (TATA-box binding protein associated factor 11); TAF11L14 (TATA-box binding protein associated factor 11 like 14); and TAF11L4 (TATA-box binding protein associated factor 11 like 4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See taf-11.1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (4255170..4256812)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Helix-loop-helix protein 13 Neighboring gene Serpentine receptor class gamma Neighboring gene Serpentine receptor class gamma Neighboring gene GOST seven transmembrane domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    contributes_to RNA polymerase II general transcription initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in intracellular organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription factor TFIID complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    TAFII28-like protein domain-containing protein
    NP_508727.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      4255170..4256812
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076326.5NP_508727.1  TAFII28-like protein domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508727.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20563
      Conserved Domains (1) summary
      pfam04719
      Location:238324
      TAFII28; hTAFII28-like protein conserved region