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    B0334.5 Phytoene synthase [ Caenorhabditis elegans ]

    Gene ID: 174761, updated on 9-Dec-2024

    Summary

    Official Symbol
    B0334.5
    Official Full Name
    Phytoene synthase
    Primary source
    WormBase:WBGene00007145
    Locus tag
    CELE_B0334.5
    See related
    AllianceGenome:WB:WBGene00007145
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in biosynthetic process and regulation of biological quality. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in Fanconi renotubular syndrome 5 and nuclear type mitochondrial complex I deficiency 17. Orthologous to human NDUFAF6 (NADH:ubiquinone oxidoreductase complex assembly factor 6). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See B0334.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (11497665..11499625)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Chloride channel CLIC-like protein 1 Neighboring gene PRELI/MSF1 domain-containing protein Neighboring gene Membrane magnesium transporter Neighboring gene Uncharacterized protein Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of biological quality IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Phytoene synthase
    NP_001369891.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      11497665..11499625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383956.2NP_001369891.1  Phytoene synthase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17477
      Conserved Domains (1) summary
      pfam00494
      Location:141409
      SQS_PSY; Squalene/phytoene synthase