Y51A2D.13 PLD phosphodiesterase domain-containing protein [Caenorhabditis elegans] - Gene

Summary

Go to the top of the page Help

Official Symbol: Y51A2D.13
Official Full Name: PLD phosphodiesterase domain-containing protein
Primary source: WormBase:WBGene00013080
Locus tag: CELE_Y51A2D.13
See related: AllianceGenome:WB:WBGene00013080
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable catalytic activity. Predicted to be located in membrane. Orthologous to human PLD5 (phospholipase D family member 5). [provided by Alliance of Genome Resources, Dec 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See Y51A2D.13 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 9

Sequence:: Chromosome: V; NC_003283.11 (18573056..18579784, complement)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

Y51A2D.13 (e-PCR)
- UniSTS:313330

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: PLD phosphodiesterase domain-containing protein

NP_507632.1

Confirmed by transcript evidence

NP_872145.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

18573056..18579784 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_075231.6 → NP_507632.1 PLD phosphodiesterase domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_507632.1

Status: REVIEWED

UniProtKB/TrEMBL

Q9XXR6

Conserved Domains (3) summary

cd09106
Location:57 → 215

PLDc_vPLD3_4_5_like_1; Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins

cd09107
Location:267 → 445

PLDc_vPLD3_4_5_like_2; Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins

PHA02820
Location:49 → 453

PHA02820; phospholipase-D-like protein; Provisional
NM_182345.5 → NP_872145.1 PLD phosphodiesterase domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_872145.1

Status: REVIEWED

UniProtKB/TrEMBL

Q8I4C7

Conserved Domains (3) summary

cd09106
Location:60 → 218

PLDc_vPLD3_4_5_like_1; Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins

cd09107
Location:270 → 448

PLDc_vPLD3_4_5_like_2; Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins

PHA02820
Location:52 → 456

PHA02820; phospholipase-D-like protein; Provisional