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    clc-4 CLaudin-like in Caenorhabditis [ Caenorhabditis elegans ]

    Gene ID: 188095, updated on 9-Dec-2024

    Summary

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    Official Symbol
    clc-4
    Official Full Name
    CLaudin-like in Caenorhabditis
    Primary source
    WormBase:WBGene00000525
    Locus tag
    CELE_T05A10.2
    See related
    AllianceGenome:WB:WBGene00000525
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in epithelial cell-cell adhesion. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See clc-4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (10782927..10783922, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Apple domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Transcription factor sma-9 Neighboring gene Transthyretin-like family protein Neighboring gene SCP domain-containing protein Neighboring gene DUF19 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Claudins in Caenorhabditis elegans: their distribution and barrier function in the epithelium. Asano A, et al. Curr Biol, 2003 Jun 17. PMID 12814550
    2. Claudin family proteins in Caenorhabditis elegans. Simske JS, et al. Methods Mol Biol, 2011. PMID 21717355
    3. A pair of RNA binding proteins inhibit ion transporter expression to maintain lifespan. Napier-Jameson R, et al. Genetics, 2024 Feb 7. PMID 38112749,
    4. Cell adhesion receptors in C. elegans. Cox EA, et al. J Cell Sci, 2004 Apr 15. PMID 15090591
    5. Sticky worms: adhesion complexes in C. elegans. Cox EA, et al. J Cell Sci, 2004 Apr 15. PMID 15090594

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in epithelial cell-cell adhesion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CLaudin-like in Caenorhabditis
    NP_509800.1
    • Product from WormBase gene class clc;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10782927..10783922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077399.2 → NP_509800.1  CLaudin-like in Caenorhabditis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509800.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22191
    Nucleotide Protein
    Heading Accession and Version

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