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    math-4 MATH domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173548, updated on 18-Sep-2024

    Summary

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    Official Symbol
    math-4
    Official Full Name
    MATH domain-containing protein
    Primary source
    WormBase:WBGene00015609
    Locus tag
    CELE_C08F1.5
    See related
    AllianceGenome:WB:WBGene00015609
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See math-4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    12
    Sequence:
    Chromosome: II; NC_003280.10 (1778772..1782574, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MATH domain-containing protein Neighboring gene MATH domain-containing protein Neighboring gene MATH domain-containing protein Neighboring gene DUF1624 domain-containing protein Neighboring gene Serpentine Receptor, class U

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    General protein information

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    Preferred Names
    MATH domain-containing protein
    NP_001040735.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      1778772..1782574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047270.4 → NP_001040735.2  MATH domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040735.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYK6
      Conserved Domains (3) summary
      smart00061
      Location:440 → 534
      MATH; meprin and TRAF homology
      pfam00917
      Location:290 → 408
      MATH; MATH domain
      cl02446
      Location:12 → 128
      MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...
    Nucleotide Protein
    Heading Accession and Version

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