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    sre-28 Serpentine Receptor, class E (Epsilon) [ Caenorhabditis elegans ]

    Gene ID: 188216, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sre-28
    Official Full Name
    Serpentine Receptor, class E (Epsilon)
    Primary source
    WormBase:WBGene00011570
    Locus tag
    CELE_T07C12.6
    See related
    AllianceGenome:WB:WBGene00011570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in head and intestine. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sre-28 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (9944393..9945895)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene Neuropeptide-Like Protein Neighboring gene Transthyretin-like protein 46

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Predicting PDZ domain-peptide interactions from primary sequences. Chen JR, et al. Nat Biotechnol, 2008 Sep. PMID 18711339, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class E (Epsilon)
    NP_505560.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9944393..9945895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073159.1 → NP_505560.1  Serpentine Receptor, class E (Epsilon) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505560.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22284
      Conserved Domains (1) summary
      pfam03125
      Location:1 → 359
      Sre; C. elegans Sre G protein-coupled chemoreceptor
    Nucleotide Protein
    Heading Accession and Version

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