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    fbxa-64 F-box domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 189026, updated on 9-Dec-2024

    Summary

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    Official Symbol
    fbxa-64
    Official Full Name
    F-box domain-containing protein
    Primary source
    WormBase:WBGene00020883
    Locus tag
    CELE_T28A11.21
    See related
    AllianceGenome:WB:WBGene00020883
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in body wall musculature; ventral nerve cord; and vulval muscle. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See fbxa-64 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (3276956..3278151, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DUF19 domain-containing protein Neighboring gene DUF19 domain-containing protein Neighboring gene DUF19 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The embryonic muscle transcriptome of Caenorhabditis elegans. Fox RM, et al. Genome Biol, 2007. PMID 17848203, Free PMC Article
    2. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    3. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    F-box domain-containing protein
    NP_503905.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3276956..3278151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071504.4 → NP_503905.2  F-box domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503905.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91522
      Conserved Domains (2) summary
      smart00256
      Location:22 → 62
      FBOX; A Receptor for Ubiquitination Targets
      pfam01827
      Location:134 → 277
      FTH; FTH domain
    Nucleotide Protein
    Heading Accession and Version

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