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    C05D11.1 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 175914, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C05D11.1
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00015481
    Locus tag
    CELE_C05D11.1
    See related
    AllianceGenome:WB:WBGene00015481
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C05D11.1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (6436608..6439964)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Thioredoxin domain-containing protein 9 Neighboring gene Vacuolar protein sorting-associated protein 16 homolog Neighboring gene Serine hydroxymethyltransferase Neighboring gene Vicilin-like seed storage protein At2g18540

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
    2. The conserved histone chaperone LIN-53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans. Müthel S, et al. Aging Cell, 2019 Dec. PMID 31397537, Free PMC Article
    3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_001021145.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6436608..6439964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001025974.9 → NP_001021145.1  Uncharacterized protein CELE_C05D11.1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021145.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P48053
      Conserved Domains (4) summary
      COG0612
      Location:10 → 458
      PqqL; Predicted Zn-dependent peptidase [General function prediction only]
      pfam00675
      Location:51 → 164
      Peptidase_M16; Insulinase (Peptidase family M16)
      pfam05193
      Location:194 → 376
      Peptidase_M16_C; Peptidase M16 inactive domain
      pfam08367
      Location:455 → 586
      M16C_assoc; Peptidase M16C associated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P48053.2

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