U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cah-5 Putative carbonic anhydrase 5 [ Caenorhabditis elegans ]

    Gene ID: 180972, updated on 9-Dec-2024

    Summary

    Official Symbol
    cah-5
    Official Full Name
    Putative carbonic anhydrase 5
    Primary source
    WormBase:WBGene00000283
    Locus tag
    CELE_R173.1
    See related
    AllianceGenome:WB:WBGene00000283
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable carbonate dehydratase activity. Predicted to be involved in one-carbon metabolic process. Predicted to be located in extracellular region. Predicted to be active in cytoplasm. Is expressed in several structures, including body wall musculature; intestine; neurons; pharynx; and vulva. Human ortholog(s) of this gene implicated in autosomal recessive osteopetrosis 3; cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome 3; osteopetrosis; and retinitis pigmentosa. Orthologous to several human genes including CA1 (carbonic anhydrase 1) and CA13 (carbonic anhydrase 13). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See cah-5 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (7020033..7023950)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GGAGEPLAFSPDMLSLRF-amide Neighboring gene Carboxylesterase type B domain-containing protein Neighboring gene ncRNA

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables lyase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Putative carbonic anhydrase 5
    NP_509186.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      7020033..7023950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076785.5NP_509186.3  Putative carbonic anhydrase 5 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509186.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q10462
      Conserved Domains (1) summary
      smart01057
      Location:28275
      Carb_anhydrase; Eukaryotic-type carbonic anhydrase