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    C05D11.5 Putative hydroxypyruvate isomerase [ Caenorhabditis elegans ]

    Gene ID: 182258, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C05D11.5
    Official Full Name
    Putative hydroxypyruvate isomerase
    Primary source
    WormBase:WBGene00015483
    Locus tag
    CELE_C05D11.5
    See related
    AllianceGenome:WB:WBGene00015483
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydroxypyruvate isomerase activity. Predicted to be involved in glyoxylate metabolic process. Is expressed in body wall musculature; hypodermis; intestine; and reproductive system. Orthologous to human HYI (hydroxypyruvate isomerase (putative)). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C05D11.5 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (6410020..6412014, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Protein let-756 Neighboring gene Metalloendopeptidase;Zinc metalloproteinase nas-4 Neighboring gene PNPLA domain-containing protein;Patatin-like phospholipase domain-containing protein atgl-1 Neighboring gene FHIP family protein C05D11.8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydroxypyruvate isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hydroxypyruvate isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in glyoxylate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Putative hydroxypyruvate isomerase
    NP_498404.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6410020..6412014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066003.7 → NP_498404.1  Putative hydroxypyruvate isomerase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498404.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q11185
      Conserved Domains (2) summary
      COG3622
      Location:6 → 251
      Hyi; Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]
      pfam01261
      Location:26 → 224
      AP_endonuc_2; Xylose isomerase-like TIM barrel
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q11185.1

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