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    odr-10 Serpentine receptor class r-10 [ Caenorhabditis elegans ]

    Gene ID: 180959, updated on 9-Dec-2024

    Summary

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    Official Symbol
    odr-10
    Official Full Name
    Serpentine receptor class r-10
    Primary source
    WormBase:WBGene00003856
    Locus tag
    CELE_C53B7.5
    See related
    AllianceGenome:WB:WBGene00003856
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables G protein-coupled olfactory receptor activity and G-protein alpha-subunit binding activity. Involved in several processes, including detection of chemical stimulus involved in sensory perception; olfactory behavior; and positive chemotaxis. Located in several cellular components, including neuronal cell body; non-motile cilium; and periciliary membrane compartment. Is expressed in AWAL; AWAR; and in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See odr-10 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (6864315..6865939, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Neuronal immunoglobulin domain-containing protein rig-3 Neighboring gene ncRNA Neighboring gene Peptidase M13 C-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Micelle-stabilized Olfactory Receptors for a Bioelectronic Nose Detecting Butter Flavors in Real Fermented Alcoholic Beverages. Shin N, et al. Sci Rep, 2020 Jun 3. PMID 32493940, Free PMC Article
    2. High-level soluble expression of one model olfactory receptor (ODR-10) in Escherichia coli cell-free system. Zhang X, et al. World J Microbiol Biotechnol, 2014 Mar. PMID 24092392
    3. Label-free functional assays of chemical receptors using a bioengineered cell-based biosensor with localized extracellular acidification measurement. Du L, et al. Biosens Bioelectron, 2014 Apr 15. PMID 24333934
    4. Bioengineered olfactory sensory neuron-based biosensor for specific odorant detection. Du L, et al. Biosens Bioelectron, 2013 Feb 15. PMID 23036770
    5. Sex, age, and hunger regulate behavioral prioritization through dynamic modulation of chemoreceptor expression. Ryan DA, et al. Curr Biol, 2014 Nov 3. PMID 25438941, Free PMC Article

    See all (89) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables G protein-coupled olfactory receptor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables G protein-coupled receptor activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables G-protein alpha-subunit binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in G protein-coupled receptor signaling pathway ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    involved_in chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in detection of chemical stimulus involved in sensory perception IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in olfactory behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in olfactory behavior IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in positive chemotaxis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to stimulus IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in ciliary membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in dendrite IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in periciliary membrane compartment IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class r-10
    NP_509157.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      6864315..6865939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076756.5 → NP_509157.1  Serpentine receptor class r-10 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509157.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q17376, Q18807
      Conserved Domains (1) summary
      pfam10326
      Location:11 → 313
      7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q18807.3

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