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    LOC107722796 zinc finger and BTB domain-containing protein 44-like [ Sinocyclocheilus rhinocerous ]

    Gene ID: 107722796, updated on 28-Dec-2023

    Summary

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    Gene symbol
    LOC107722796
    Gene description
    zinc finger and BTB domain-containing protein 44-like
    See related
    Ensembl:ENSSRHG00000025076
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sinocyclocheilus rhinocerous
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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    Genomic context

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    See LOC107722796 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current SAMN03320098_v1.1 (GCF_001515625.1) Unplaced Scaffold NW_015658610.1 (216800..236356, complement)

    NW_015658610.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim8 A-like Neighboring gene succinate dehydrogenase complex, subunit D, integral membrane protein a Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 8-like Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 15-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015658610.1 Unplaced Scaffold Reference SAMN03320098_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 44-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sinocyclocheilus rhinocerous Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SAMN03320098_v1.1 Primary Assembly

    Genomic

    1. NW_015658610.1 Reference SAMN03320098_v1.1 Primary Assembly

      Range
      216800..236356 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016531274.1 → XP_016386760.1  zinc finger and BTB domain-containing protein 44-like isoform X1

      UniProtKB/TrEMBL
      A0A673JA63, A0A673JDP8
      Related
      ENSSRHP00000049790.1, ENSSRHT00000051195.1

    2. XM_016531275.1 → XP_016386761.1  zinc finger and BTB domain-containing protein 44-like isoform X2

      UniProtKB/TrEMBL
      A0A673JDP8

    3. XM_016531276.1 → XP_016386762.1  zinc finger and BTB domain-containing protein 44-like isoform X3

      UniProtKB/TrEMBL
      A0A673J7R4
    Nucleotide Protein
    Heading Accession and Version

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