U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC100572430 uncharacterized LOC100572430 [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100572430, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100572430
    Gene description
    uncharacterized LOC100572430
    See related
    EnsemblRapid:LOC100572430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100572430 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (130378601..130381395, complement)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384124.1 (241426..244218)

    Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4H1 Neighboring gene patatin like phospholipase domain containing sws Neighboring gene CG17271-like Neighboring gene RNA-binding protein 28 Neighboring gene fuzzy planar cell polarity protein-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-macromolecule adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC100572430

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      130378601..130381395 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008187657.3 → XP_008185879.1  uncharacterized protein LOC100572430

      See identical proteins and their annotated locations for XP_008185879.1

      UniProtKB/TrEMBL
      A0A8R2A6A1
      Related
      XP_008185879.1, XM_008187657.3
      Conserved Domains (1) summary
      pfam03694
      Location:8 → 120
      Erg28; Erg28 like protein

    2. XM_016806727.2 → XP_016662216.1  uncharacterized protein LOC100572430

      UniProtKB/TrEMBL
      A0A8R2A6A1
      Related
      XP_016662216.1, XM_016806727.2
      Conserved Domains (1) summary
      pfam03694
      Location:8 → 120
      Erg28; Erg28 like protein

    3. XM_003246368.3 → XP_003246416.1  uncharacterized protein LOC100572430

      See identical proteins and their annotated locations for XP_003246416.1

      UniProtKB/TrEMBL
      A0A8R2A6A1
      Related
      XP_003246416.1, XM_003246368.3
      Conserved Domains (1) summary
      pfam03694
      Location:8 → 120
      Erg28; Erg28 like protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials