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    LOC100558174 sialidase-3-like [ Anolis carolinensis (green anole) ]

    Gene ID: 100558174, updated on 3-Apr-2024

    Summary

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    Gene symbol
    LOC100558174
    Gene description
    sialidase-3-like
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
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    Genomic context

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    See LOC100558174 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (5576359..5583643)
    102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339036.1 (406418..408804, complement)

    Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene X-ray radiation resistance associated 1 Neighboring gene uncharacterized LOC134297313 Neighboring gene signal peptidase complex subunit 2 Neighboring gene sialidase-3 Neighboring gene sialidase-3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New insights on the sialidase protein family revealed by a phylogenetic analysis in metazoa. Giacopuzzi E, et al. PLoS One, 2012. PMID 22952925, Free PMC Article
    2. Gallus gallus NEU3 sialidase as model to study protein evolution mechanism based on rapid evolving loops. Giacopuzzi E, et al. BMC Biochem, 2011 Aug 23. PMID 21861893, Free PMC Article
    3. Cloning and characterization of NEU2, a human gene homologous to rodent soluble sialidases. Monti E, et al. Genomics, 1999 Apr 1. PMID 10191093
    4. Molecular cloning and characterization of NEU4, the fourth member of the human sialidase gene family. Monti E, et al. Genomics, 2004 Mar. PMID 14962670
    5. Identification and expression of NEU3, a novel human sialidase associated to the plasma membrane. Monti E, et al. Biochem J, 2000 Jul 1. PMID 10861246, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables exo-alpha-sialidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sialidase-3-like
    Names
    sialidase NEU3.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001328222.1 → NP_001315151.1  sialidase-3-like

      Status: PROVISIONAL

      Source sequence(s)
      BK008549
      UniProtKB/TrEMBL
      K0PUS2
      Conserved Domains (2) summary
      cd15482
      Location:18 → 401
      Sialidase_non-viral; Non-viral sialidases
      pfam13088
      Location:45 → 376
      BNR_2; BNR repeat-like domain

    RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rAnoCar3.1.pri

    Genomic

    1. NC_085843.1 Reference rAnoCar3.1.pri

      Range
      5576359..5583643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_062974328.1 → XP_062830398.1  sialidase-3-like isoform X1

      UniProtKB/TrEMBL
      H9GT35
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases