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    Gm39327 predicted gene, 39327 [ Mus musculus (house mouse) ]

    Gene ID: 105243393, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm39327provided by MGI
    Official Full Name
    predicted gene, 39327provided by MGI
    Primary source
    MGI:MGI:5622212
    See related
    AllianceGenome:MGI:5622212
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in testis adult (RPKM 1.3), colon adult (RPKM 0.2) and 3 other tissues See more
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    Genomic context

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    See Gm39327 in Genome Data Viewer
    Location:
    9 A5.2; 9
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (45078351..45080478, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (45167053..45169180, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10684 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:44929112-44929313 Neighboring gene sodium channel, voltage-gated, type II, beta Neighboring gene sodium channel, type IV, beta Neighboring gene STARR-seq mESC enhancer starr_23992 Neighboring gene transmembrane protease, serine 4 Neighboring gene predicted gene, 57797 Neighboring gene small integral membrane protein 35 Neighboring gene STARR-positive B cell enhancer mm9_chr9:45029701-45030002 Neighboring gene STARR-positive B cell enhancer mm9_chr9:45054121-45054422 Neighboring gene interleukin 10 receptor, alpha Neighboring gene microRNA 7086

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      45078351..45080478 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001779348.1 RNA Sequence

    2. XR_001779346.1 RNA Sequence

    3. XR_001779345.1 RNA Sequence

    4. XR_001779347.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials