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    ECU08_0250 vacuolar H+-ATPase V1 sector subunit H [ Encephalitozoon cuniculi GB-M1 ]

    Gene ID: 859576, updated on 17-May-2024

    Summary

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    Gene symbol
    ECU08_0250
    Gene description
    vacuolar H+-ATPase V1 sector subunit H
    Locus tag
    ECU08_0250
    See related
    MicrosporidiaDB:ECU08_0250; VEuPathDB:ECU08_0250
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
    Lineage
    Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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    Genomic context

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    See ECU08_0250 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_003235.1 (35009..36136, complement)

    Chromosome VIII - NC_003235.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene GTP-binding protein Neighboring gene cyclin Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003235.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
    2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar H+-ATPase V1 sector subunit H
    NP_597154.1
    • 08_0250, VACUOLAR ATP SYNTHASE 54KDA SUBUNIT, VM13_yeast, gene found by Glimmer

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003235.1 Reference assembly

      Range
      35009..36136 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001041763.1 → NP_597154.1  vacuolar H+-ATPase V1 sector subunit H [Encephalitozoon cuniculi GB-M1]

      See identical proteins and their annotated locations for NP_597154.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      M1JI45, Q8SRF3
      Conserved Domains (3) summary
      COG5231
      Location:1 → 375
      VMA13; Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion]
      pfam11698
      Location:265 → 374
      V-ATPase_H_C; V-ATPase subunit H
      cl21727
      Location:146 → 365
      VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...
    Nucleotide Protein
    Heading Accession and Version

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