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    SPAG6 sperm associated antigen 6 [ Aptenodytes forsteri (emperor penguin) ]

    Gene ID: 103895608, updated on 3-Aug-2024

    Summary

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    Gene symbol
    SPAG6
    Gene description
    sperm associated antigen 6
    Locus tag
    AS27_09256
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aptenodytes forsteri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
    Orthologs
    human mouse all
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    Genomic context

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    See SPAG6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794911.1 (4317399..4344358, complement)

    NW_008794911.1Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 3 Neighboring gene phosphatidylinositol-5-phosphate 4-kinase type 2 alpha Neighboring gene uncharacterized LOC103895609 Neighboring gene transfer RNA asparagine (anticodon GUU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008794911.1 Unplaced Scaffold Reference ASM69914v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cilium movement involved in extracellular fluid movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in filopodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection extension IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in acrosomal vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm principal piece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sperm-associated antigen 6
    Names
    Sperm-associated antigen 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69914v1

    Genomic

    1. NW_008794911.1 Reference ASM69914v1

      Range
      4317399..4344358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019471005.1 → XP_019326550.1  sperm-associated antigen 6

      UniProtKB/TrEMBL
      A0A087QU97
    Nucleotide Protein
    Heading Accession and Version

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